Nanome - Nanopore methylation database
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Methylation Calling Results at site level
*All fields are required to display the result.
Dataset
NA19240
NA12878
APL
K562
Chromosome
chr1
chr2
chr3
chr4
chr5
chr6
chr7
chr8
chr9
chr10
chr11
chr12
chr13
chr14
chr15
chr16
chr17
chr18
chr19
chr20
chr21
chr22
chrX
chrY
Strand
+
-
Singleton/Non-singleton
singleton
non-singleton
Genomic location
exon
intergenic
intron
promoter
CpG location
CpG islands
CpG shelves
CpG shores
CG density
100%
80%
60%
40%
20%
Repetitive regions
DNA transposons
LINE
LTR
Others
SINE
Methylation calling results
All start coordinates shown here are 1-based, not 0-based.
Methylation correlation plotting for each methylation-calling tool compared to BS-seq
NA19240
NA12878
APL
K562